Index

B

BY_METHOD (in module diffupath.constants)

D

DATABASES (in module diffupath.constants) DDR_NAME (in module diffupath.constants) DEFAULT_DIFFUPATH_DIR (in module diffupath.constants) diffupath.constants module

diffupath.repeated_holdout module DRUGBANK_NAME (in module diffupath.constants)

E

ensure_output_dirs() (in module diffupath.constants)

G

GENE_ONTOLOGY_NAME (in module diffupath.constants)

H

HSDN_NAME (in module diffupath.constants)

K

KEGG_NAME (in module diffupath.constants)

M

MIRTARBASE_NAME (in module diffupath.constants) module diffupath.constants diffupath.repeated_holdout

O

OUTPUT_DIFFUPATH_DIR (in module diffupath.constants)

P

PHEWAS_NAME (in module diffupath.constants)

R

REACTOME_NAME (in module diffupath.constants)

S

SIDER_NAME (in module diffupath.constants)

V

validation_by_method() (in module diffupath.repeated_holdout)

validation_by_subgraph() (in module diffupath.repeated_holdout)

W

WIKIPATHWAYS_NAME (in module diffupath.constants)