Command Line Interface¶
The following commands can be used directly use from your terminal:
Download a database for network analysis.
The following command generates a BEL file representing the network of the given database.
$ python3 -m diffupath database network --database=<database-name>
To check the available databases, run the following command:
$ python3 -m diffupath database ls
Run a diffusion analysis
The following command will run a diffusion method on a given network with the given data
$ python3 -m diffupath diffusion run --network=<path-to-network-file> --input=<path-to-data-file> --method=<method>